INFORMATION ABOUT THE ORF FINDER PROGRAM FOR SEARCHING FOR THE OPEN COMPUTATION FRAMEWORK

Authors

  • Saidto‘rayeva Maftuna Xusniddin qizi Andijon davlat universiteti
  • Dusmatova Gulbahor Abdurashidovna Andijon davlat universiteti

Keywords:

Uzbek open reading frame, nucleotide sequence, protein synthesis, genetic code, translation, bioinformatics, software analysis, amino acid sequence, genome, protein function, BLAST analysis, DNA analysis.

Abstract

ORF Finder (Open Reading Frame Finder) helps to find protein-coding regions by identifying open reading frames in DNA sequences. Using the ORF Finder tool, it is possible to identify potential genes in genetic material, assess their coding potential, and prepare them for further bioinformatic analysis. This program is widely used in scientific research, especially in the fields of genetic analysis and genome annotation.

References

Emms D.M., Kelly S. AlignWise: A tool for identifying protein-coding regions and correcting frameshifts in ESTs and transcript sequences. BMC Bioinformatics 16. 2015. 269. https://doi.org/10.1186/s12859-015-0813-8

Fassetti F., Giallombardo C., Leone O., Bianco L. Fedro: A tool for automatic detection of new ORFs created by C→U RNA editing events in plant mitochondria. BMC Bioinformatics 20. 2019. 629. https://doi.org/10.1186/s12859-019-2696-6

Larsen T.S., Krogh A. EasyGene–a prokaryotic gene finder that ranks ORFs by statistical significance. BMC Bioinformatics 21. 2003. https://doi.org/10.1186/1471-2105-4-21

National Center for Biotechnology Information NCBI. ORF Finder (Open Reading Frame Finder). Retrieved from https://www.ncbi.nlm.nih.gov/orffinder

Woodcroft B.J., Singleton C.M., Boyd J.A., Evans P.N., Emerson J.B., Zayed A.A., Tyson G.W. OrfM: a fast open reading frame (ORF) prediction tool for metagenomic data. Bioinformatics 32(17). 2016. 2702–2703. https://doi.org/10.1093/bioinformatics/btw241

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Published

2025-06-23

Issue

Vol. 2 No. 4.4 (2025): International scientific and practical conference on "Problems and prospects of modern biology"

Section

Articles

License

Copyright (c) 2025 Saidto‘rayeva Maftuna Xusniddin qizi, Dusmatova Gulbahor Abdurashidovna

Creative Commons License

This work is licensed under a Creative Commons Attribution 4.0 International License.

How to Cite

INFORMATION ABOUT THE ORF FINDER PROGRAM FOR SEARCHING FOR THE OPEN COMPUTATION FRAMEWORK. (2025). Universal International Scientific Journal, 2(4.4), 341-342. https://universaljurnal.uz/index.php/jurnal/article/view/2833